SHISA4 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SHISA4

Shisa family member 4. (115 aa)

Predicted Functional Partners:

H2AZ2

0.701

NAP1L4

0.700

ENSCAPP00000006069

0.699

UMPS

0.613

TBP

0.606

ENSCAPP00000015721

0.606

ENSCAPP00000014824

0.580

MACROH2A2

0.575

MACROH2A1

0.575

TBPL1

0.575

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000006069	H2AZ2	ENSCAPP00000006069	ENSCAPP00000015311	annotation not available	H2A.Z variant histone 2.	0.930
ENSCAPP00000006069	MACROH2A1	ENSCAPP00000006069	ENSCAPP00000014257	annotation not available	macroH2A.1 histone.	0.719
ENSCAPP00000006069	MACROH2A2	ENSCAPP00000006069	ENSCAPP00000004347	annotation not available	macroH2A.2 histone.	0.719
ENSCAPP00000006069	NAP1L4	ENSCAPP00000006069	ENSCAPP00000017240	annotation not available	Nucleosome assembly protein 1 like 4.	0.628
ENSCAPP00000006069	SHISA4	ENSCAPP00000006069	ENSCAPP00000005125	annotation not available	Shisa family member 4.	0.699
ENSCAPP00000014824	SHISA4	ENSCAPP00000014824	ENSCAPP00000005125	annotation not available	Shisa family member 4.	0.580
ENSCAPP00000015721	H2AZ2	ENSCAPP00000015721	ENSCAPP00000015311	annotation not available	H2A.Z variant histone 2.	0.874
ENSCAPP00000015721	MACROH2A1	ENSCAPP00000015721	ENSCAPP00000014257	annotation not available	macroH2A.1 histone.	0.683
ENSCAPP00000015721	MACROH2A2	ENSCAPP00000015721	ENSCAPP00000004347	annotation not available	macroH2A.2 histone.	0.683
ENSCAPP00000015721	SHISA4	ENSCAPP00000015721	ENSCAPP00000005125	annotation not available	Shisa family member 4.	0.606
ENSCAPP00000015721	TBP	ENSCAPP00000015721	ENSCAPP00000013484	annotation not available	TATA-box binding protein.	0.807
ENSCAPP00000015721	TBPL1	ENSCAPP00000015721	ENSCAPP00000016818	annotation not available	TATA-box binding protein like 1.	0.927
H2AZ2	ENSCAPP00000006069	ENSCAPP00000015311	ENSCAPP00000006069	H2A.Z variant histone 2.	annotation not available	0.930
H2AZ2	ENSCAPP00000015721	ENSCAPP00000015311	ENSCAPP00000015721	H2A.Z variant histone 2.	annotation not available	0.874
H2AZ2	MACROH2A1	ENSCAPP00000015311	ENSCAPP00000014257	H2A.Z variant histone 2.	macroH2A.1 histone.	0.946
H2AZ2	MACROH2A2	ENSCAPP00000015311	ENSCAPP00000004347	H2A.Z variant histone 2.	macroH2A.2 histone.	0.946
H2AZ2	NAP1L4	ENSCAPP00000015311	ENSCAPP00000017240	H2A.Z variant histone 2.	Nucleosome assembly protein 1 like 4.	0.928
H2AZ2	SHISA4	ENSCAPP00000015311	ENSCAPP00000005125	H2A.Z variant histone 2.	Shisa family member 4.	0.701
H2AZ2	TBP	ENSCAPP00000015311	ENSCAPP00000013484	H2A.Z variant histone 2.	TATA-box binding protein.	0.874
H2AZ2	TBPL1	ENSCAPP00000015311	ENSCAPP00000016818	H2A.Z variant histone 2.	TATA-box binding protein like 1.	0.807