Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005128annotation not available (796 aa)    
Predicted Functional Partners:
CLCA1
Chloride channel accessory 1.
     
  0.842
CLCA2
Chloride channel accessory 2.
     
  0.842
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.787
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
   
 
  0.725
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.666
ENSCAPP00000008997
annotation not available
   
    0.665
COCH
Cochlin.
    
 0.639
ENSCAPP00000002113
annotation not available
   
  0.620
CALHM2
Calcium homeostasis modulator family member 2.
   
    0.600
ENSCAPP00000013050
annotation not available
   
    0.600
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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