STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC23A1Solute carrier family 23 member 1. (592 aa)    
Predicted Functional Partners:
GART
annotation not available
  
  
 0.910
UMPS
Uridine monophosphate synthetase.
  
  
 0.859
ENSCAPP00000015455
annotation not available
  
  
 
0.804
GOLT1B
Golgi transport 1B.
  
  
 0.786
GOLT1A
Golgi transport 1A.
  
  
 0.786
ENSCAPP00000011327
annotation not available
  
  
 0.723
DHODH
Dihydroorotate dehydrogenase (quinone).
  
  
 0.723
MED6
Mediator complex subunit 6.
    
  0.671
ENSCAPP00000003704
annotation not available
  
  
 0.653
SGPL1
Sphingosine-1-phosphate lyase 1.
    
 0.653
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.