Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC23A1Solute carrier family 23 member 1. (592 aa)    
Predicted Functional Partners:
SIL1
SIL1 nucleotide exchange factor.
      
 0.907
ENSCAPP00000015455
annotation not available
     
  0.865
MZB1
Marginal zone B and B1 cell specific protein.
     
 0.793
UMPS
Uridine monophosphate synthetase.
  
  
 0.758
SLC7A6
Solute carrier family 7 member 6.
     
 0.751
SLC44A4
Solute carrier family 44 member 4.
      
 0.747
GART
annotation not available
  
  
 0.740
GOLT1B
Golgi transport 1B.
  
  
 0.719
GOLT1A
Golgi transport 1A.
  
  
 0.719
GRM2
Glutamate metabotropic receptor 2.
      
 0.686
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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