Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005138annotation not available (68 aa)    
Predicted Functional Partners:
KRR1
KRR1 small subunit processome component homolog.
   
 0.993
KRI1
KRI1 homolog.
   
 
 0.987
WDR43
WD repeat domain 43.
   
 
 0.977
DDX52
DExD-box helicase 52.
   
 0.974
NOP58
NOP58 ribonucleoprotein.
   
 
 0.955
UTP11
UTP11 small subunit processome component.
   
 
 0.951
RBM19
RNA binding motif protein 19.
   
   0.943
UTP4
UTP4 small subunit processome component.
   
   0.938
CMSS1
Cms1 ribosomal small subunit homolog.
   
  
 0.933
NOP14
NOP14 nucleolar protein.
   
 0.932
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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