STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM259Transmembrane protein 259. (426 aa)    
Predicted Functional Partners:
ENSCAPP00000017572
annotation not available
   
    0.621
CACHD1
Cache domain containing 1.
      
 0.566
SMPDL3B
Sphingomyelin phosphodiesterase acid like 3B.
      
 0.562
EMC1
ER membrane protein complex subunit 1.
      
 0.558
CAPNS1
Calpain small subunit 1.
   
  
 0.553
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A.
      
 0.552
GGCX
Gamma-glutamyl carboxylase.
      
 0.552
TMUB1
Transmembrane and ubiquitin like domain containing 1.
    
 
 0.549
NSFL1C
NSFL1 cofactor.
      
 0.530
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
      
 0.524
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.