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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GARS1glycyl-tRNA synthetase 1. (533 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.977
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.958
SARS1
seryl-tRNA synthetase 1.
   
  
 0.941
ENSCAPP00000008966
annotation not available
   
 0.893
POLG
DNA polymerase gamma, catalytic subunit.
   
 0.893
AARS1
alanyl-tRNA synthetase 1.
  
 
 0.885
AARS2
alanyl-tRNA synthetase 2, mitochondrial.
  
 
 0.865
IARS1
isoleucyl-tRNA synthetase 1.
  
 
 0.863
DNA2
DNA replication helicase/nuclease 2.
 
   
 0.842
PRIM2
DNA primase subunit 2.
    
  0.827
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.