Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRUNE1Prune exopolyphosphatase 1. (453 aa)    
Predicted Functional Partners:
GSK3B
Glycogen synthase kinase 3 beta.
    
 
 0.972
GSK3A
Glycogen synthase kinase 3 alpha.
    
 
 0.960
ENSCAPP00000011200
annotation not available
 
   
 0.945
CYFIP1
Cytoplasmic FMR1 interacting protein 1.
      
 0.872
ENSCAPP00000006457
annotation not available
     
 0.864
GMPPB
GDP-mannose pyrophosphorylase B.
    
   0.754
APRT
Adenine phosphoribosyltransferase.
    
 0.699
NME1
NME/NM23 nucleoside diphosphate kinase 1.
  
 
 0.620
UTP20
UTP20 small subunit processome component.
      
 0.587
NME3
NME/NM23 nucleoside diphosphate kinase 3.
  
 
 0.576
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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