Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA19Spermatogenesis associated 19. (132 aa)    
Predicted Functional Partners:
AKAP3
A-kinase anchoring protein 3.
  
  
 0.638
SPATA17
Spermatogenesis associated 17.
      
 0.638
ENSCAPP00000002944
annotation not available
   
 
 0.617
THEG
Theg spermatid protein.
      
 0.616
PIH1D1
PIH1 domain containing 1.
      
 0.615
ARMC12
Armadillo repeat containing 12.
   
  
 0.605
ENSCAPP00000013812
annotation not available
   
  
 0.596
TEX35
Testis expressed 35.
   
  
 0.596
VDAC3
Voltage dependent anion channel 3.
    
 
 0.587
CEP70
Centrosomal protein 70.
      
 0.583
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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