STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA19Spermatogenesis associated 19. (132 aa)    
Predicted Functional Partners:
CEP70
Centrosomal protein 70.
      
 0.547
KLC3
Kinesin light chain 3.
      
 0.520
ATP10B
ATPase phospholipid transporting 10B (putative).
      
 0.518
MCRS1
Microspherule protein 1.
      
 0.518
SH3TC1
SH3 domain and tetratricopeptide repeats 1.
      
 0.518
ENSCAPP00000011466
annotation not available
  
     0.501
ENSCAPP00000012124
annotation not available
  
     0.498
ENSCAPP00000011468
annotation not available
  
     0.485
ENSCAPP00000011535
annotation not available
  
   
 0.484
AKAP3
A-kinase anchoring protein 3.
  
  
 0.449
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.