Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAF12TATA-box binding protein associated factor 12. (213 aa)    
Predicted Functional Partners:
SGF29
SAGA complex associated factor 29.
   
 0.999
TAF5
TATA-box binding protein associated factor 5.
   
 0.999
TAF4
TATA-box binding protein associated factor 4.
    
 0.999
TADA3
Transcriptional adaptor 3.
   
 0.999
TAF8
TATA-box binding protein associated factor 8.
   
 0.999
TBP
TATA-box binding protein.
    
 0.999
TAF6
TATA-box binding protein associated factor 6.
   
 0.999
KAT2A
Lysine acetyltransferase 2A.
   
 0.998
SUPT7L
SPT7 like, STAGA complex gamma subunit.
    
 0.998
TAF9
TATA-box binding protein associated factor 9.
   
 0.998
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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