Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JPH1Junctophilin 1. (532 aa)    
Predicted Functional Partners:
JPH4
Junctophilin 4.
   
 0.864
RYR1
Ryanodine receptor 1.
   
 0.815
BAG5
BCL2 associated athanogene 5.
     
  0.788
RYR2
Ryanodine receptor 2.
   
 0.785
CASQ2
Calsequestrin 2.
   
 0.710
WDR90
WD repeat domain 90.
    
 0.697
RYR3
Ryanodine receptor 3.
   
 0.682
ENSCAPP00000003958
annotation not available
   
 0.613
ENSCAPP00000009412
annotation not available
   
 0.613
JPH3
Junctophilin 3.
     
  0.603
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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