STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JPH1Junctophilin 1. (532 aa)    
Predicted Functional Partners:
JPH4
Junctophilin 4.
   
 
0.828
ENSCAPP00000002664
annotation not available
   
 0.700
RYR1
Ryanodine receptor 1.
   
 0.696
ASB5
Ankyrin repeat and SOCS box containing 5.
   
 0.677
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
   
 
 0.653
CASQ2
Calsequestrin 2.
   
 0.639
CACNA1C
Calcium voltage-gated channel subunit alpha1 C.
   
 
 0.610
ASB13
Ankyrin repeat and SOCS box containing 13.
   
 0.592
CACNA1D
Calcium voltage-gated channel subunit alpha1 D.
   
 
 0.591
CACNA1F
Calcium voltage-gated channel subunit alpha1 F.
   
 
 0.587
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.