Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005167annotation not available (108 aa)    
Predicted Functional Partners:
NSMCE4A
NSE4 homolog A, SMC5-SMC6 complex component.
   
 0.836
NSMCE1
NSE1 homolog, SMC5-SMC6 complex component.
    
 0.824
SMC5
Structural maintenance of chromosomes 5.
    
 0.823
SMC6
Structural maintenance of chromosomes 6.
    
 0.820
NSMCE2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.819
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
  0.687
NGFR
Nerve growth factor receptor.
    
 0.634
RANBP2
RAN binding protein 2.
   
  0.597
SMC3
Structural maintenance of chromosomes 3.
    
 0.587
SMC1A
Structural maintenance of chromosomes 1A.
    
 0.565
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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