Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005168annotation not available (42 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
    
 0.997
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 0.987
UBXN2A
UBX domain protein 2A.
     
 0.949
UBXN6
UBX domain protein 6.
    
 0.943
ENSCAPP00000016289
annotation not available
    
 0.937
NSFL1C
NSFL1 cofactor.
     
 0.922
UBXN4
UBX domain protein 4.
     
 0.913
DERL1
Derlin 1.
    
 
 0.873
AMFR
Autocrine motility factor receptor.
    
 
 0.868
UBXN2B
UBX domain protein 2B.
     
 0.865
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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