STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005168annotation not available (42 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
    
 0.975
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 0.878
UBXN6
UBX domain protein 6.
    
 0.837
NSFL1C
NSFL1 cofactor.
     
 0.833
UBXN2A
UBX domain protein 2A.
     
 0.833
UBXN4
UBX domain protein 4.
     
 0.807
ENSCAPP00000016289
annotation not available
    
 0.795
UBXN2B
UBX domain protein 2B.
     
 0.737
ENSCAPP00000008370
annotation not available
    
 0.725
FAF1
Fas associated factor 1.
     
 0.716
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.