STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HS3ST2Heparan sulfate-glucosamine 3-sulfotransferase 2. (203 aa)    
Predicted Functional Partners:
SDC1
Syndecan 1.
     
 0.514
ENSCAPP00000002179
annotation not available
     
 0.456
GPC4
Glypican 4.
     
 0.456
ENSCAPP00000004695
annotation not available
     
 0.456
GPC1
Glypican 1.
     
 0.456
ENSCAPP00000015376
annotation not available
     
 0.456
GPC3
Glypican 3.
     
 0.438
GPC5
Glypican 5.
     
 0.438
SDC3
Syndecan 3.
     
 0.434
HS3ST1
Heparan sulfate-glucosamine 3-sulfotransferase 1.
  
  
 
0.402
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.