Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005171annotation not available (181 aa)    
Predicted Functional Partners:
IGF2
Insulin like growth factor 2.
   
 0.995
IGFALS
Insulin like growth factor binding protein acid labile subunit.
    
 0.992
IGFBP5
Insulin like growth factor binding protein 5.
   
 
 0.936
ENSCAPP00000009388
annotation not available
    
 
 0.922
ENSCAPP00000001391
annotation not available
     
 0.915
PDGFB
Platelet derived growth factor subunit B.
     
 0.911
IGF1
Insulin like growth factor 1.
     
 0.905
PDGFA
Platelet derived growth factor subunit A.
     
 0.899
BNIP3
BCL2 interacting protein 3.
      
 0.885
APAF1
Apoptotic peptidase activating factor 1.
      
 0.879
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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