STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005172annotation not available (582 aa)    
Predicted Functional Partners:
TAP1
Transporter 1, ATP binding cassette subfamily B member.
   
 0.999
ABCB9
ATP binding cassette subfamily B member 9.
   
 0.995
TAPBPL
TAP binding protein like.
   
 
 0.965
PDIA3
Protein disulfide isomerase family A member 3.
   
 0.944
CALR
Calreticulin.
   
 0.930
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
 0.915
CALR3
Calreticulin 3.
   
 0.909
ENSCAPP00000007150
annotation not available
   
 0.906
PSMB8
Proteasome 20S subunit beta 8.
   
 0.893
PSMB9
Proteasome 20S subunit beta 9.
   
 0.879
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.