STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC14L4SEC14 like lipid binding 4. (384 aa)    
Predicted Functional Partners:
CTSF
Cathepsin F.
      
 0.562
TMEM38B
Transmembrane protein 38B.
      
 0.555
PPTC7
PTC7 protein phosphatase homolog.
    
   0.514
PLD2
Phospholipase D2.
    
 
 0.512
PLD1
Phospholipase D1.
    
 
 0.512
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
  0.479
UGT8
UDP glycosyltransferase 8.
     
 0.474
ENSCAPP00000001062
annotation not available
    
  0.473
ENSCAPP00000016139
annotation not available
    
   0.471
AP1G1
Adaptor related protein complex 1 subunit gamma 1.
    
 0.470
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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