STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSD4Pleckstrin and Sec7 domain containing 4. (934 aa)    
Predicted Functional Partners:
ARL14
ADP ribosylation factor like GTPase 14.
    
 
 0.709
THNSL2
Threonine synthase like 2.
    
 
 0.574
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
     
0.564
PTGFRN
Prostaglandin F2 receptor inhibitor.
      
 0.518
FBLN7
Fibulin 7.
      
 0.518
CYTH4
Cytohesin 4.
     
0.489
ARL15
ADP ribosylation factor like GTPase 15.
    
 
 0.487
AP3M1
Adaptor related protein complex 3 subunit mu 1.
      
 0.434
ENSCAPP00000010699
annotation not available
  
     0.420
ENSCAPP00000014439
annotation not available
  
     0.418
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.