Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSD4Pleckstrin and Sec7 domain containing 4. (934 aa)    
Predicted Functional Partners:
ARL14
ADP ribosylation factor like GTPase 14.
    
 
 0.966
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
   0.799
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
     
 0.695
AP3M1
Adaptor related protein complex 3 subunit mu 1.
      
 0.686
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
     
  0.676
GIT2
GIT ArfGAP 2.
    
 
 0.667
CHAMP1
Chromosome alignment maintaining phosphoprotein 1.
      
 0.617
RAP1GDS1
Rap1 GTPase-GDP dissociation stimulator 1.
      
 0.577
PAX8
Paired box 8.
      
 0.576
ARFRP1
ADP ribosylation factor related protein 1.
      
 0.570
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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