STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACBD6acyl-CoA binding domain containing 6. (175 aa)    
Predicted Functional Partners:
ACOX2
acyl-CoA oxidase 2.
  
 0.751
ACOX1
acyl-CoA oxidase 1.
  
 0.751
ACOX3
acyl-CoA oxidase 3, pristanoyl.
  
 0.748
ENSCAPP00000003426
annotation not available
  
 
 0.735
GCDH
glutaryl-CoA dehydrogenase.
  
 0.725
NMT2
N-myristoyltransferase 2.
    
 
 0.715
ACADS
acyl-CoA dehydrogenase short chain.
  
 0.715
HADHB
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
  
 
 0.705
ACAT2
acetyl-CoA acetyltransferase 2.
  
 
 0.704
ACAT1
acetyl-CoA acetyltransferase 1.
  
 
 0.704
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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