Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005186annotation not available (68 aa)    
Predicted Functional Partners:
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.986
CD9
CD9 molecule.
   
 
 0.979
ITGB1
Integrin subunit beta 1.
   
 0.971
IGSF8
Immunoglobulin superfamily member 8.
    
 
 0.941
ADAM10
ADAM metallopeptidase domain 10.
    
 0.892
FLOT1
Flotillin 1.
      
 0.878
TSG101
Tumor susceptibility 101.
    
 
 0.873
SDCBP2
Syndecan binding protein 2.
    
 0.865
SDCBP
Syndecan binding protein.
    
 0.864
ITGB4
Integrin subunit beta 4.
    
 0.824
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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