Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRT4Keratin 4. (479 aa)    
Predicted Functional Partners:
ENSCAPP00000016201
annotation not available
   
 0.987
DSG4
Desmoglein 4.
     
 0.916
DSG1
Desmoglein 1.
    
 0.869
DSG3
Desmoglein 3.
    
  0.855
DSG2
Desmoglein 2.
    
  0.855
KRT15
Keratin 15.
   
  0.820
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.649
TGM1
Transglutaminase 1.
   
 0.637
SERPINB12
Serpin family B member 12.
   
 0.607
RANBP2
RAN binding protein 2.
    
 0.604
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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