STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHM2Pleckstrin homology and RUN domain containing M2. (966 aa)    
Predicted Functional Partners:
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 
 0.872
ENSCAPP00000016835
annotation not available
   
 
 0.712
UBQLN4
Ubiquilin 4.
   
 
 0.696
PSMD2
Proteasome 26S subunit, non-ATPase 2.
    
 
 0.693
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 
 0.655
ENSCAPP00000002824
annotation not available
   
 
 0.646
UBL7
Ubiquitin like 7.
   
 
 0.646
ENSCAPP00000000492
annotation not available
    
 
 0.639
ENSCAPP00000004155
annotation not available
    
 
 0.639
ENSCAPP00000014462
annotation not available
    
 
 0.639
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.