STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIMKLARibosomal modification protein rimK like family member A. (368 aa)    
Predicted Functional Partners:
ENSCAPP00000016502
annotation not available
     
 0.935
FOLH1
Folate hydrolase 1.
     
 0.915
RIMKLB
Ribosomal modification protein rimK like family member B.
  
  
 
0.908
GATB
glutamyl-tRNA amidotransferase subunit B.
    
  0.780
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.768
PRDX5
Peroxiredoxin 5.
     
 0.768
CS
Citrate synthase.
    
 0.742
IDH3A
Isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha.
    
 0.741
QRSL1
glutaminyl-tRNA amidotransferase subunit QRSL1.
    
 0.716
FAAH
Fatty acid amide hydrolase.
    
 0.716
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.