Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S100GS100 calcium binding protein G. (79 aa)    
Predicted Functional Partners:
CALB1
Calbindin 1.
    
 0.900
PVALB
Parvalbumin.
    
 0.723
TRPV6
Transient receptor potential cation channel subfamily V member 6.
      
 0.649
DUSP14
Dual specificity phosphatase 14.
   
 0.634
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.625
CALB2
Calbindin 2.
    
 0.620
ATP2B1
ATPase plasma membrane Ca2+ transporting 1.
   
 
 0.607
ENSCAPP00000017763
annotation not available
    
 0.602
SDF4
Stromal cell derived factor 4.
    
 
 0.600
TRPV5
Transient receptor potential cation channel subfamily V member 5.
      
 0.551
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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