STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLMNCalmin. (957 aa)    
Predicted Functional Partners:
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
  0.991
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.959
SUN3
Sad1 and UNC84 domain containing 3.
    
 0.959
SUN5
Sad1 and UNC84 domain containing 5.
    
 0.959
ENSCAPP00000015390
annotation not available
    
 0.959
CCDC155
Coiled-coil domain containing 155.
    
  0.950
ENSCAPP00000015020
annotation not available
     
  0.947
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.933
ENSCAPP00000003219
annotation not available
     
 0.924
LRMP
Lymphoid restricted membrane protein.
    
  0.840
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.