TRIM32 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

TRIM32

Tripartite motif containing 32. (653 aa)

Predicted Functional Partners:

STING1

0.993

PDE9A

0.959

ENSCAPP00000000972

0.922

ENSCAPP00000008606

0.922

TRIM35

0.906

ENSCAPP00000011901

0.880

ENSCAPP00000013362

0.879

ENSCAPP00000000214

0.874

ENSCAPP00000009782

0.874

ENSCAPP00000011310

0.874

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000000214	ENSCAPP00000000972	ENSCAPP00000000214	ENSCAPP00000000972	annotation not available	annotation not available	0.531
ENSCAPP00000000214	ENSCAPP00000008606	ENSCAPP00000000214	ENSCAPP00000008606	annotation not available	annotation not available	0.531
ENSCAPP00000000214	ENSCAPP00000011901	ENSCAPP00000000214	ENSCAPP00000011901	annotation not available	annotation not available	0.563
ENSCAPP00000000214	TRIM32	ENSCAPP00000000214	ENSCAPP00000005214	annotation not available	Tripartite motif containing 32.	0.874
ENSCAPP00000000214	TRIM35	ENSCAPP00000000214	ENSCAPP00000001816	annotation not available	Tripartite motif containing 35.	0.407
ENSCAPP00000000972	ENSCAPP00000000214	ENSCAPP00000000972	ENSCAPP00000000214	annotation not available	annotation not available	0.531
ENSCAPP00000000972	ENSCAPP00000009782	ENSCAPP00000000972	ENSCAPP00000009782	annotation not available	annotation not available	0.531
ENSCAPP00000000972	ENSCAPP00000011310	ENSCAPP00000000972	ENSCAPP00000011310	annotation not available	annotation not available	0.531
ENSCAPP00000000972	ENSCAPP00000011901	ENSCAPP00000000972	ENSCAPP00000011901	annotation not available	annotation not available	0.485
ENSCAPP00000000972	TRIM32	ENSCAPP00000000972	ENSCAPP00000005214	annotation not available	Tripartite motif containing 32.	0.922
ENSCAPP00000008606	ENSCAPP00000000214	ENSCAPP00000008606	ENSCAPP00000000214	annotation not available	annotation not available	0.531
ENSCAPP00000008606	ENSCAPP00000009782	ENSCAPP00000008606	ENSCAPP00000009782	annotation not available	annotation not available	0.531
ENSCAPP00000008606	ENSCAPP00000011310	ENSCAPP00000008606	ENSCAPP00000011310	annotation not available	annotation not available	0.531
ENSCAPP00000008606	ENSCAPP00000011901	ENSCAPP00000008606	ENSCAPP00000011901	annotation not available	annotation not available	0.485
ENSCAPP00000008606	TRIM32	ENSCAPP00000008606	ENSCAPP00000005214	annotation not available	Tripartite motif containing 32.	0.922
ENSCAPP00000009782	ENSCAPP00000000972	ENSCAPP00000009782	ENSCAPP00000000972	annotation not available	annotation not available	0.531
ENSCAPP00000009782	ENSCAPP00000008606	ENSCAPP00000009782	ENSCAPP00000008606	annotation not available	annotation not available	0.531
ENSCAPP00000009782	ENSCAPP00000011901	ENSCAPP00000009782	ENSCAPP00000011901	annotation not available	annotation not available	0.563
ENSCAPP00000009782	TRIM32	ENSCAPP00000009782	ENSCAPP00000005214	annotation not available	Tripartite motif containing 32.	0.874
ENSCAPP00000009782	TRIM35	ENSCAPP00000009782	ENSCAPP00000001816	annotation not available	Tripartite motif containing 35.	0.407