Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC3A1Solute carrier family 3 member 1. (669 aa)    
Predicted Functional Partners:
SLC7A13
Solute carrier family 7 member 13.
  
 0.980
ENSCAPP00000002305
annotation not available
  
 0.975
ENSCAPP00000006922
annotation not available
  
 0.975
ENSCAPP00000013650
annotation not available
  
 0.975
ENSCAPP00000016219
annotation not available
  
 0.974
PREPL
Prolyl endopeptidase like.
  
  
 0.898
SLC7A6
Solute carrier family 7 member 6.
  
 0.874
SLC7A7
Solute carrier family 7 member 7.
  
 0.852
SLC7A5
Solute carrier family 7 member 5.
   
 0.841
GBE1
1,4-alpha-glucan branching enzyme 1.
  
 
 0.822
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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