STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRKHTudor and KH domain containing. (520 aa)    
Predicted Functional Partners:
PIWIL1
Piwi like RNA-mediated gene silencing 1.
   
 0.972
ENSCAPP00000000829
annotation not available
   
 0.887
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
 0.778
TDRD9
Tudor domain containing 9.
    
 0.763
ENSCAPP00000014470
annotation not available
     
 0.750
MAEL
Maelstrom spermatogenic transposon silencer.
     
 0.749
FKBP6
FKBP prolyl isomerase 6.
     
 0.747
ENSCAPP00000004198
annotation not available
    
 0.727
PLD6
Phospholipase D family member 6.
    
 
 0.699
PNLDC1
PARN like, ribonuclease domain containing 1.
      
 0.688
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.