Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN4Tetraspanin 4. (154 aa)    
Predicted Functional Partners:
CPQ
Carboxypeptidase Q.
   
 
 0.748
PIGK
Phosphatidylinositol glycan anchor biosynthesis class K.
     
 0.748
POLL
DNA polymerase lambda.
      
 0.745
ENSCAPP00000017396
annotation not available
     
  0.714
CTIF
Cap binding complex dependent translation initiation factor.
      
 0.687
SCARB1
Scavenger receptor class B member 1.
     
 0.668
EOGT
EGF domain specific O-linked N-acetylglucosamine transferase.
      
 0.665
USP2
Ubiquitin specific peptidase 2.
      
 0.663
RASGRP4
RAS guanyl releasing protein 4.
     
 0.643
ITGA6
Integrin subunit alpha 6.
    
 0.621
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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