ENSCAPP00000005233 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSCAPP00000005233

annotation not available (539 aa)

Predicted Functional Partners:

ENSCAPP00000010684

0.899

PPP1CA

0.899

PPP1CB

0.891

SAMD14

0.890

ENSCAPP00000000802

0.889

ACTN2

0.764

DLG4

0.764

ENSCAPP00000011751

0.702

RASSF2

0.690

PPP1R3A

0.615

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTN2	DLG4	ENSCAPP00000004418	ENSCAPP00000018691	Actinin alpha 2.	Discs large MAGUK scaffold protein 4.	0.572
ACTN2	ENSCAPP00000005233	ENSCAPP00000004418	ENSCAPP00000005233	Actinin alpha 2.	annotation not available	0.764
ACTN2	ENSCAPP00000010684	ENSCAPP00000004418	ENSCAPP00000010684	Actinin alpha 2.	annotation not available	0.764
ACTN2	ENSCAPP00000011751	ENSCAPP00000004418	ENSCAPP00000011751	Actinin alpha 2.	annotation not available	0.923
DLG4	ACTN2	ENSCAPP00000018691	ENSCAPP00000004418	Discs large MAGUK scaffold protein 4.	Actinin alpha 2.	0.572
DLG4	ENSCAPP00000005233	ENSCAPP00000018691	ENSCAPP00000005233	Discs large MAGUK scaffold protein 4.	annotation not available	0.764
DLG4	ENSCAPP00000010684	ENSCAPP00000018691	ENSCAPP00000010684	Discs large MAGUK scaffold protein 4.	annotation not available	0.764
DLG4	ENSCAPP00000011751	ENSCAPP00000018691	ENSCAPP00000011751	Discs large MAGUK scaffold protein 4.	annotation not available	0.951
ENSCAPP00000000802	ENSCAPP00000005233	ENSCAPP00000000802	ENSCAPP00000005233	annotation not available	annotation not available	0.889
ENSCAPP00000000802	ENSCAPP00000010684	ENSCAPP00000000802	ENSCAPP00000010684	annotation not available	annotation not available	0.889
ENSCAPP00000000802	ENSCAPP00000011751	ENSCAPP00000000802	ENSCAPP00000011751	annotation not available	annotation not available	0.983
ENSCAPP00000000802	PPP1CA	ENSCAPP00000000802	ENSCAPP00000017677	annotation not available	Protein phosphatase 1 catalytic subunit alpha.	0.991
ENSCAPP00000000802	PPP1CB	ENSCAPP00000000802	ENSCAPP00000017888	annotation not available	Protein phosphatase 1 catalytic subunit beta.	0.991
ENSCAPP00000000802	PPP1R3A	ENSCAPP00000000802	ENSCAPP00000012996	annotation not available	Protein phosphatase 1 regulatory subunit 3A.	0.948
ENSCAPP00000000802	RASSF2	ENSCAPP00000000802	ENSCAPP00000005633	annotation not available	Ras association domain family member 2.	0.476
ENSCAPP00000000802	SAMD14	ENSCAPP00000000802	ENSCAPP00000011558	annotation not available	Sterile alpha motif domain containing 14.	0.400
ENSCAPP00000005233	ACTN2	ENSCAPP00000005233	ENSCAPP00000004418	annotation not available	Actinin alpha 2.	0.764
ENSCAPP00000005233	DLG4	ENSCAPP00000005233	ENSCAPP00000018691	annotation not available	Discs large MAGUK scaffold protein 4.	0.764
ENSCAPP00000005233	ENSCAPP00000000802	ENSCAPP00000005233	ENSCAPP00000000802	annotation not available	annotation not available	0.889
ENSCAPP00000005233	ENSCAPP00000010684	ENSCAPP00000005233	ENSCAPP00000010684	annotation not available	annotation not available	0.899