Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005239annotation not available (128 aa)    
Predicted Functional Partners:
MTMR2
Myotubularin related protein 2.
   
  0.993
MTM1
Myotubularin 1.
   
  0.989
ENSCAPP00000002610
annotation not available
    
 0.967
PIK3C2B
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta.
    
 0.967
MTMR14
Myotubularin related protein 14.
     
 0.961
ENSCAPP00000008469
annotation not available
     
 0.955
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.954
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.952
MTMR7
Myotubularin related protein 7.
    
 0.944
MTMR6
Myotubularin related protein 6.
    
  0.944
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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