STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX24DEAD-box helicase 24. (709 aa)    
Predicted Functional Partners:
RBM28
RNA binding motif protein 28.
   
 
 0.991
ENSCAPP00000014188
annotation not available
   
 0.990
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.988
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.988
RBM34
RNA binding motif protein 34.
   
 0.988
WDR12
WD repeat domain 12.
   
 0.988
CEBPZ
CCAAT enhancer binding protein zeta.
   
 0.987
ENSCAPP00000010582
annotation not available
   
 0.986
DDX54
DEAD-box helicase 54.
  
 
0.985
DDX18
DEAD-box helicase 18.
  
 
0.983
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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