Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005247annotation not available (129 aa)    
Predicted Functional Partners:
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.962
ENSCAPP00000016476
annotation not available
 
 
   0.961
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.946
FXR2
FMR1 autosomal homolog 2.
    
 
 0.936
FXR1
FMR1 autosomal homolog 1.
    
 
 0.936
PRMT1
Protein arginine methyltransferase 1.
   
 
 0.932
RPTOR
Regulatory associated protein of MTOR complex 1.
    
   0.926
MTOR
Mechanistic target of rapamycin kinase.
    
   0.926
UBAP2L
Ubiquitin associated protein 2 like.
 
     0.915
RYBP
RING1 and YY1 binding protein.
    
  0.914
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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