STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NR2E1Nuclear receptor subfamily 2 group E member 1. (260 aa)    
Predicted Functional Partners:
ENSCAPP00000018394
annotation not available
    
 0.839
KDM1A
Lysine demethylase 1A.
    
 0.758
MED1
Mediator complex subunit 1.
    
  0.735
HDAC5
Histone deacetylase 5.
    
 0.735
NCOR2
Nuclear receptor corepressor 2.
    
 0.687
ENSCAPP00000011708
annotation not available
    
 0.683
ENSCAPP00000013862
annotation not available
    
 0.683
ENSCAPP00000001068
annotation not available
    
 0.581
NCOA3
Nuclear receptor coactivator 3.
    
 0.581
RBM22
RNA binding motif protein 22.
   
 0.579
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.