Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC35E1Solute carrier family 35 member E1. (250 aa)    
Predicted Functional Partners:
TMEM165
Transmembrane protein 165.
   
   0.889
SLC35G1
Solute carrier family 35 member G1.
      
 0.758
SLC35C1
Solute carrier family 35 member C1.
      
 0.688
ENSCAPP00000012184
annotation not available
      
 0.667
SLC35D1
Solute carrier family 35 member D1.
      
 0.634
SLC25A42
Solute carrier family 25 member 42.
      
 0.633
SLC35B4
Solute carrier family 35 member B4.
      
 0.591
CHERP
Calcium homeostasis endoplasmic reticulum protein.
      
 0.575
SLC35F1
Solute carrier family 35 member F1.
      
 0.570
CIB3
Calcium and integrin binding family member 3.
      
 0.569
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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