STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC5Zinc finger DHHC-type containing 5. (702 aa)    
Predicted Functional Partners:
GOLGA7B
Golgin A7 family member B.
    
 0.994
CLDND1
Claudin domain containing 1.
    
   0.959
MSANTD3
Myb/SANT DNA binding domain containing 3.
    
   0.844
TMEFF1
Transmembrane protein with EGF like and two follistatin like domains 1.
    
   0.844
IQGAP1
IQ motif containing GTPase activating protein 1.
    
   0.602
BRD1
Bromodomain containing 1.
   
  
 0.585
ENSCAPP00000009531
annotation not available
      
 0.577
TMEM54
Transmembrane protein 54.
    
 
 0.576
ZDHHC13
Zinc finger DHHC-type containing 13.
      
 0.572
ENSCAPP00000001703
annotation not available
      
 0.569
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.