Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005263annotation not available (309 aa)    
Predicted Functional Partners:
ENSCAPP00000012673
annotation not available
   
  
 0.731
SRP54
Signal recognition particle 54.
    
   0.675
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.649
ENSCAPP00000006838
annotation not available
    
 0.628
ZYG11B
Zyg-11 family member B, cell cycle regulator.
    
   0.607
RANBP2
RAN binding protein 2.
    
 0.604
ENSCAPP00000002046
annotation not available
    
 
 0.577
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.569
TEP1
Telomerase associated protein 1.
    
 0.548
KDM6B
Lysine demethylase 6B.
    
 0.546
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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