STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC1Small nuclear RNA activating complex polypeptide 1. (336 aa)    
Predicted Functional Partners:
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
 0.999
GTF2B
General transcription factor IIB.
    
 0.953
ENSCAPP00000013253
annotation not available
    
 0.942
TBP
TATA-box binding protein.
   
 0.942
GTF2A2
General transcription factor IIA subunit 2.
    
  0.887
ENSCAPP00000015721
annotation not available
   
 0.878
GTF2A1
General transcription factor IIA subunit 1.
    
  0.856
TBPL1
TATA-box binding protein like 1.
   
 0.836
GTF2A1L
General transcription factor IIA subunit 1 like.
    
  0.808
GTF2E1
General transcription factor IIE subunit 1.
     
 0.693
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.