STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005276annotation not available (678 aa)    
Predicted Functional Partners:
ENSCAPP00000013152
annotation not available
 
  
 
 0.891
RAB8A
RAB8A, member RAS oncogene family.
   
 
 0.774
ENSCAPP00000005688
annotation not available
   
 
 0.690
RAB8B
RAB8B, member RAS oncogene family.
   
 
 0.636
RAB10
RAB10, member RAS oncogene family.
   
 
 0.608
ENSCAPP00000005544
annotation not available
   
0.596
STK4
Serine/threonine kinase 4.
    
  0.557
STK3
Serine/threonine kinase 3.
    
  0.557
RAB15
RAB15, member RAS oncogene family.
   
 
 0.549
KIF23
Kinesin family member 23.
    
 
 0.546
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.