Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GNB1LG protein subunit beta 1 like. (271 aa)    
Predicted Functional Partners:
ENSCAPP00000016826
annotation not available
    
 0.944
JAGN1
Jagunal homolog 1.
      
 0.935
TRNT1
tRNA nucleotidyl transferase 1.
  
 0.843
RUVBL2
RuvB like AAA ATPase 2.
     
 0.770
DGCR8
DGCR8 microprocessor complex subunit.
     
 0.722
WDR46
WD repeat domain 46.
   
 
 0.713
ENSCAPP00000003889
annotation not available
    
 
 0.711
RUVBL1
RuvB like AAA ATPase 1.
    
 0.704
ENSCAPP00000009319
annotation not available
    
 0.704
ITM2B
Integral membrane protein 2B.
      
 0.671
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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