Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005281annotation not available (350 aa)    
Predicted Functional Partners:
NREP
Neuronal regeneration related protein.
   
    0.995
TH
Tyrosine hydroxylase.
      
 0.915
PVALB
Parvalbumin.
     
 0.907
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 
 0.896
TUBA4A
Tubulin alpha 4a.
    
 
 0.895
ENSCAPP00000011751
annotation not available
    
 
 0.837
PCNA
Proliferating cell nuclear antigen.
      
 0.801
SYNPR
Synaptoporin.
   
  
 0.791
ENSCAPP00000006375
annotation not available
    
 
 0.787
GFAP
Glial fibrillary acidic protein.
    
 
 0.776
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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