STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005282annotation not available (236 aa)    
Predicted Functional Partners:
FH
Fumarate hydratase.
   
  0.595
ATG16L2
Autophagy related 16 like 2.
      
 0.565
SUCLG1
succinate-CoA ligase alpha subunit.
   
 
  0.539
PTGR1
Prostaglandin reductase 1.
  
     0.530
GIN1
Gypsy retrotransposon integrase 1.
    
 
 0.509
ZMYM3
Zinc finger MYM-type containing 3.
    
 
 0.486
ENSCAPP00000000165
annotation not available
  
 
 0.475
ENSCAPP00000000457
annotation not available
  
 
 0.475
ENSCAPP00000009099
annotation not available
  
 
 0.475
ENSCAPP00000011054
annotation not available
  
 
 0.475
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.