Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005285annotation not available (132 aa)    
Predicted Functional Partners:
CCDC120
Coiled-coil domain containing 120.
     
 0.915
CCDC68
Coiled-coil domain containing 68.
     
  0.913
ENSCAPP00000008774
annotation not available
     
  0.913
NIN
Ninein.
     
  0.911
CEP128
Centrosomal protein 128.
     
  0.910
CNTRL
Centriolin.
     
  0.909
GNG12
G protein subunit gamma 12.
    
 0.889
GNB5
G protein subunit beta 5.
    
  0.878
GNGT2
G protein subunit gamma transducin 2.
    
  0.878
GNG2
G protein subunit gamma 2.
    
  0.878
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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