Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005292annotation not available (239 aa)    
Predicted Functional Partners:
ANGPTL1
Angiopoietin like 1.
   
 
 0.951
FN1
Fibronectin 1.
    
  0.949
FGL1
Fibrinogen like 1.
   
 
  0.949
FGB
Fibrinogen beta chain.
     
  0.947
FGG
Fibrinogen gamma chain.
     
  0.947
ENSCAPP00000014476
annotation not available
     
  0.947
THBS1
Thrombospondin 1.
    
 0.937
ENSCAPP00000001566
annotation not available
   
 
 0.919
SERPINF2
Serpin family F member 2.
    
  0.913
ENSCAPP00000013552
annotation not available
     
 0.896
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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