STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHACTR1Phosphatase and actin regulator 1. (557 aa)    
Predicted Functional Partners:
ENSCAPP00000000802
annotation not available
    
 
 0.583
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
 
 0.583
ACTA1
Actin alpha 1, skeletal muscle.
    
   0.566
ACTC1
Actin alpha cardiac muscle 1.
    
   0.566
ACTA2
Actin alpha 2, smooth muscle.
    
   0.566
ENSCAPP00000007947
annotation not available
      
 0.560
MRTFB
Myocardin related transcription factor B.
      
 0.558
ENSCAPP00000017829
annotation not available
      
 0.556
LRRC45
Leucine rich repeat containing 45.
      
 0.546
DIP2C
Disco interacting protein 2 homolog C.
     
 0.545
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.