STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R21Protein phosphatase 1 regulatory subunit 21. (824 aa)    
Predicted Functional Partners:
C12orf4
Chromosome 12 open reading frame 4.
    
 
 0.989
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
    
   0.957
ENSCAPP00000011763
annotation not available
    
   0.932
ENSCAPP00000000013
annotation not available
    
   0.894
ENSCAPP00000008466
annotation not available
    
   0.808
ENSCAPP00000009728
annotation not available
    
   0.808
ENSCAPP00000011648
annotation not available
    
   0.808
ENSCAPP00000016116
annotation not available
    
   0.808
TBCK
TBC1 domain containing kinase.
   
 
 0.782
AQP9
Aquaporin 9.
    
   0.691
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.