STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRDChordin. (818 aa)    
Predicted Functional Partners:
BMP4
Bone morphogenetic protein 4.
    
 0.975
BMP5
Bone morphogenetic protein 5.
    
 0.918
BMP6
Bone morphogenetic protein 6.
    
 0.914
GDF5
Growth differentiation factor 5.
    
 0.899
ENSCAPP00000006608
annotation not available
   
 0.892
ENSCAPP00000008999
annotation not available
    
 0.883
BMP1
Bone morphogenetic protein 1.
   
 
 0.858
TLL1
Tolloid like 1.
    
 
 0.824
TLL2
Tolloid like 2.
    
 
 0.810
NODAL
Nodal growth differentiation factor.
    
 0.792
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.