Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005302annotation not available (94 aa)    
Predicted Functional Partners:
ENSCAPP00000002153
annotation not available
    
 0.996
ENSCAPP00000006743
annotation not available
    
 0.989
CHMP4B
Charged multivesicular body protein 4B.
   
  0.983
ENSCAPP00000017217
annotation not available
    
 0.979
CHMP4C
Charged multivesicular body protein 4C.
    
  0.977
CHMP2B
Charged multivesicular body protein 2B.
    
 0.975
CHMP1A
Charged multivesicular body protein 1A.
   
 0.973
VPS4B
Vacuolar protein sorting 4 homolog B.
    
 0.961
TSG101
Tumor susceptibility 101.
     
 0.950
STAM
Signal transducing adaptor molecule.
    
 0.934
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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