Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005308annotation not available (56 aa)    
Predicted Functional Partners:
ENSCAPP00000000576
annotation not available
   
 0.984
ENSCAPP00000004781
annotation not available
   
 0.984
ENSCAPP00000004658
annotation not available
   
 0.934
RPL14
Ribosomal protein L14.
   
 0.934
RPL19
Ribosomal protein L19.
   
 0.934
ENSCAPP00000012651
annotation not available
  
 0.934
RPL5
Ribosomal protein L5.
   
 0.934
RPL31
Ribosomal protein L31.
  
 0.934
RPL8
Ribosomal protein L8.
   
 0.933
RPL32
Ribosomal protein L32.
   
 0.933
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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