STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS36Vacuolar protein sorting 36 homolog. (349 aa)    
Predicted Functional Partners:
SNF8
SNF8 subunit of ESCRT-II.
   
 0.999
UEVLD
UEV and lactate/malate dehyrogenase domains.
    
 0.999
ENSCAPP00000015929
annotation not available
    
 0.999
VPS28
VPS28 subunit of ESCRT-I.
    
 0.997
ENSCAPP00000017989
annotation not available
    
 0.994
TSG101
Tumor susceptibility 101.
    
 0.990
ENSCAPP00000002657
annotation not available
    
 0.983
CHMP4B
Charged multivesicular body protein 4B.
    
 0.970
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.968
VPS37B
VPS37B subunit of ESCRT-I.
     
 0.964
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.