STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005316annotation not available (224 aa)    
Predicted Functional Partners:
ENSCAPP00000009388
annotation not available
     
 0.811
SLC4A1
Solute carrier family 4 member 1 (Diego blood group).
   
 0.797
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.759
TIAM1
TIAM Rac1 associated GEF 1.
    
 0.758
EPB42
Erythrocyte membrane protein band 4.2.
   
 0.754
RHAG
Rh associated glycoprotein.
   
 0.753
SPTB
Spectrin beta, erythrocytic.
   
 0.730
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 0.718
NFASC
Neurofascin.
    
 0.714
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.711
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.