STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005316annotation not available (224 aa)    
Predicted Functional Partners:
RNF146
Ring finger protein 146.
    
 0.779
AXIN2
Axin 2.
    
 0.758
AXIN1
Axin 1.
    
 0.758
NFASC
Neurofascin.
    
 0.725
SPTB
Spectrin beta, erythrocytic.
   
 0.720
ENSCAPP00000000271
annotation not available
   
 0.696
SPTBN1
Spectrin beta, non-erythrocytic 1.
   
 0.696
ENSCAPP00000015927
annotation not available
   
 0.696
ENSCAPP00000016104
annotation not available
   
 0.696
SPTBN2
Spectrin beta, non-erythrocytic 2.
   
 0.689
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.